bacmap.wishartlab.com

BacMap

An Interactive Atlas for Exploring Bacterial Genomes. BacMap is an interactive visual database containing hundreds of fully labeled, zoomable, and searchable maps of bacterial genomes. Some features of BacMap. Maps are available for 2989 bacterial chromosomes across 1,790 bacterial organisms. Each map supports zooming and rotation. Map gene labels are hyperlinked to detailed textual annotations. Maps can be explored manually, or with the help of BacMap's built in text search and BLAST search.

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BacMap | bacmap.wishartlab.com Reviews

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An Interactive Atlas for Exploring Bacterial Genomes. BacMap is an interactive visual database containing hundreds of fully labeled, zoomable, and searchable maps of bacterial genomes. Some features of BacMap. Maps are available for 2989 bacterial chromosomes across 1,790 bacterial organisms. Each map supports zooming and rotation. Map gene labels are hyperlinked to detailed textual annotations. Maps can be explored manually, or with the help of BacMap's built in text search and BLAST search.

<META> KEYWORDS

1 citing bacmap

2 reset

3 blast search

4 sample query

5 gene/protein names

6 genus/species/strain

7 text in biocard

8 metabolic pathway

9 filter by taxonomy

10 archaea

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BacMap | bacmap.wishartlab.com Reviews

https://bacmap.wishartlab.com

An Interactive Atlas for Exploring Bacterial Genomes. BacMap is an interactive visual database containing hundreds of fully labeled, zoomable, and searchable maps of bacterial genomes. Some features of BacMap. Maps are available for 2989 bacterial chromosomes across 1,790 bacterial organisms. Each map supports zooming and rotation. Map gene labels are hyperlinked to detailed textual annotations. Maps can be explored manually, or with the help of BacMap's built in text search and BLAST search.

INTERNAL PAGES

bacmap.wishartlab.com

1

BacMap

http://bacmap.wishartlab.com/blast/new

Perform BLAST search against all genomes in BacMap. Enter DNA or amino acid query sequence(s) in raw or FASTA Format.

2

BacMap

http://bacmap.wishartlab.com/prophages/NC_009927/map

Acaryochloris marina MBIC11017 plasmid pREB2, complete sequence.

3

BacMap

http://bacmap.wishartlab.com/prophages/NC_009926/map

Acaryochloris marina MBIC11017 plasmid pREB1, complete sequence.

4

CGView map

http://bacmap.wishartlab.com/maps/genomes/NC_009926

Click tick marks to expand the view. Displayed PNG file size: 96 kb. Valid XHTML 1.0; Valid CSS. Centered on base 1; Zoom = 1.

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BacMap

http://bacmap.wishartlab.com/rnas/NC_009927/map

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stothard.afns.ualberta.ca

Stothard Research Group

http://stothard.afns.ualberta.ca/public_html/software.html

We have completed sequencing of more than 350 cattle genomes! Availability: http:/ wishart.biology.ualberta.ca/basys/. Availability: http:/ bacmap.wishartlab.com/. Availability: http:/ stothard.afns.ualberta.ca/cgview server/. A unique bioinformatics/cheminformatics resource that combines detailed drug (i.e. chemical) data with comprehensive drug target (i.e. protein) information. Availability: http:/ www.drugbank.ca/. Availability: https:/ www.gview.ca/. Availability: http:/ www.hmdb.ca/. A web server d...

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New release 5.0 of Eukaryotic-like domains finished | EffectiveDB

http://www.effectivedb.org/news/new-release-5-0-of-eukaryotic-like-domains-finished

Dept of Microbiology and Ecosystem Science. New release 5.0 of Eukaryotic-like domains finished. The eukaryotic-like domains of our EffectiveELD method have been updated. The new release 5.0 is based on an updated genome repository including all bacterial genomes from the RefSeq database. Protein domains have been annotated using Interproscan 53.0. Based on PFAM 28.0. The host associations of these genome have been obtained from the NCBI. List of microbial genomes, Genomes OnLine Database. 43 1 4277 76681.

wishart.biology.ualberta.ca

BacMap: Bacterial Genome Atlas

http://wishart.biology.ualberta.ca/BacMap

BacMap: An Interactive Atlas for Exploring Bacterial Genomes. There is a newer version of BacMap — Click here. BacMap is an interactive visual database containing hundreds of fully labeled, zoomable, and searchable maps of bacterial genomes. Some features of BacMap:. Maps are available for 2023 bacterial chromosomes. Each map supports zooming and rotation. Map gene labels are hyperlinked to detailed textual annotations. A written synopsis of each bacterial species is provided. 6,503,724 bp. Acaryochloris...

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BacMap

An Interactive Atlas for Exploring Bacterial Genomes. BacMap is an interactive visual database containing hundreds of fully labeled, zoomable, and searchable maps of bacterial genomes. Some features of BacMap. Maps are available for 2989 bacterial chromosomes across 1,790 bacterial organisms. Each map supports zooming and rotation. Map gene labels are hyperlinked to detailed textual annotations. Maps can be explored manually, or with the help of BacMap's built in text search and BLAST search.

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