bioinfo.ekmd.huji.ac.il

Bioinformatics unit :::: Home

The HUJI bioinformatics unit is part of COBI. Israeli Center Of knowledge for Bioinformatics Infrastructure. Bioinformatics units in Israel. Sites of interest (a short list). Welcome to the Bioinformatics Unit. The bioinformatics unit of the Hebrew university provides consultation, education and computational services to the Hebrew university biological and medical research community. Servers for bioinformatics analysis at the faculty of medicine. 2005 The Hebrew university of Jerusalem.

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Bioinformatics unit :::: Home | bioinfo.ekmd.huji.ac.il Reviews

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The HUJI bioinformatics unit is part of COBI. Israeli Center Of knowledge for Bioinformatics Infrastructure. Bioinformatics units in Israel. Sites of interest (a short list). Welcome to the Bioinformatics Unit. The bioinformatics unit of the Hebrew university provides consultation, education and computational services to the Hebrew university biological and medical research community. Servers for bioinformatics analysis at the faculty of medicine. 2005 The Hebrew university of Jerusalem.

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2 genomics

3 events

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6 related courses

7 research groups

8 sequence analysis

9 workshops and events

10 seminars

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Bioinformatics unit :::: Home | bioinfo.ekmd.huji.ac.il Reviews

https://bioinfo.ekmd.huji.ac.il

The HUJI bioinformatics unit is part of COBI. Israeli Center Of knowledge for Bioinformatics Infrastructure. Bioinformatics units in Israel. Sites of interest (a short list). Welcome to the Bioinformatics Unit. The bioinformatics unit of the Hebrew university provides consultation, education and computational services to the Hebrew university biological and medical research community. Servers for bioinformatics analysis at the faculty of medicine. 2005 The Hebrew university of Jerusalem.

INTERNAL PAGES

bioinfo.ekmd.huji.ac.il

1

Bioinformatics unit :::: Sequence

http://bioinfo.ekmd.huji.ac.il/sequence.asp

Sites of interest (a short list). Sequence Analysis main tools. Servers for bioinformatics analysis at HUJI. A Unix server is available. For details please contact Tamar Kahan - tamark@ekmd.huji.ac.il. Some bioinformatics applications and software are installed on the local server: http:/ biservice.ekmd.huji.ac.il/. An EKMD username and password are required for these services. EMBOSS is installed locally:. Http:/ biservice.ekmd.huji.ac.il/emboss. GCG Documentation for version 11.

2

Bioinformatics unit :::: Genomic analysis

http://bioinfo.ekmd.huji.ac.il/bilist.asp

Bioinformatics sites of interest - a short list. The European Bioinformatics Institute. National Center for Biotechnology Information. Amos' WWW links page. IBM Research Bioinformatics and Pattern Discovery Group. At the Weizmann Institute. The Hebrew University BioInformatics Team. 2005 The Hebrew university of Jerusalem.

3

Bioinformatics unit :::: Home

http://bioinfo.ekmd.huji.ac.il/default.asp

The HUJI bioinformatics unit is part of COBI. Israeli Center Of knowledge for Bioinformatics Infrastructure. Bioinformatics units in Israel. Sites of interest (a short list). Welcome to the Bioinformatics Unit. The bioinformatics unit of the Hebrew university provides consultation, education and computational services to the Hebrew university biological and medical research community. Servers for bioinformatics analysis at the faculty of medicine. 2005 The Hebrew university of Jerusalem.

4

Bioinformatics unit :::: Genomic analysis

http://bioinfo.ekmd.huji.ac.il/bicourses.asp

Bioinformatics courses at the Hebrew university. Structure and Function of Proteins (81817). Bioinformatics: Computational Sequence Analysis of Biomolecules (72677). Bioinformatics: basic sequence analysis tools (94665). Introduction to Computational Molecular Biology (67693). Probabilistic Methods in Artificial Intelligence (67800). Molecular models for drug design (64751). Quantitative Structure-Activity Relationships (64810). Bioinformatics courses on the web. 2005 The Hebrew university of Jerusalem.

5

Bioinformatics unit :::: servers

http://bioinfo.ekmd.huji.ac.il/servers.asp

Servers for bioinformatics analysis. At the faculty of medicine - Ein-Kerem. A Bioinformatics server at the faculty of medicine of the Hebrew university is available. For opening an account, please contact tamark@ekmd.huji.ac.il. Some applications are installed on the server: https:/ biservice.ekmd.huji.ac.il. EKMD user name and password are required. For more details and help, please contact tamark@ekmd.huji.ac.il. 2005 The Hebrew university of Jerusalem.

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Bioinformatics unit :::: Home

The HUJI bioinformatics unit is part of COBI. Israeli Center Of knowledge for Bioinformatics Infrastructure. Bioinformatics units in Israel. Sites of interest (a short list). Welcome to the Bioinformatics Unit. The bioinformatics unit of the Hebrew university provides consultation, education and computational services to the Hebrew university biological and medical research community. Servers for bioinformatics analysis at the faculty of medicine. 2005 The Hebrew university of Jerusalem.

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Bioinformatics : Home

The pbcore package provides Python APIs for interacting with PacBio data files and writing. Stampy is a package for the mapping of short reads from illumina sequencing machines onto a. Bridger is an efficient de novo transcriptome assembler for RNA-Seq data. It expects as input. The ALDER software computes the weighted linkage disequilibrium (LD) statistic for making inference. ShortStack is a tool developed to process and analyze smallRNA-seq data with respect to a. Facility is part of the Genotoul GIS.