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Computational Cell Biology IMB UQ

Computational Cell Biology, Teasdale Group IMB. Protein Sequence Analysis Tools. Golgi Transmembrane Protein Prediction. Support Vector Machines For Predicting Transmembrane Domains. Protein Solvent Accessible Surface Area Predictor (ASAP). Supplementary Data For Published Papers. Supplementary data for mouse proteome analysis. Supplementary data for functional classification of the mouse secretome. Mouse Protein Subcellular Localization Databases. Type II membrane proteins.

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Computational Cell Biology IMB UQ | ccb.imb.uq.edu.au Reviews

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Computational Cell Biology, Teasdale Group IMB. Protein Sequence Analysis Tools. Golgi Transmembrane Protein Prediction. Support Vector Machines For Predicting Transmembrane Domains. Protein Solvent Accessible Surface Area Predictor (ASAP). Supplementary Data For Published Papers. Supplementary data for mouse proteome analysis. Supplementary data for functional classification of the mouse secretome. Mouse Protein Subcellular Localization Databases. Type II membrane proteins.

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Computational Cell Biology IMB UQ | ccb.imb.uq.edu.au Reviews

https://ccb.imb.uq.edu.au

Computational Cell Biology, Teasdale Group IMB. Protein Sequence Analysis Tools. Golgi Transmembrane Protein Prediction. Support Vector Machines For Predicting Transmembrane Domains. Protein Solvent Accessible Surface Area Predictor (ASAP). Supplementary Data For Published Papers. Supplementary data for mouse proteome analysis. Supplementary data for functional classification of the mouse secretome. Mouse Protein Subcellular Localization Databases. Type II membrane proteins.

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ccb.imb.uq.edu.au

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Golgi Predictor Teasdale Group IMB

http://ccb.imb.uq.edu.au/golgi

Computational Cell Biology, Teasdale Group IMB. Prediction of Golgi Localised Transmembrane Proteins. Yuan Z, Teasdale RD. Prediction of Golgi Type II membrane proteins based on their transmembrane domains. Bioinformatics. 2002 Aug. 18(8): 1109-15. [ PDF ]. Submit sequences from local text file in FASTA format:. Input file must be in FASTA plain text format. Please split file before submit if file size is greater than 1MB. To find out more about the Golgi predictor. Notice for Mac users.

2

Teasdale Publications 2005

http://ccb.imb.uq.edu.au/publications

Teasdale Publications, Computational Cell Biology IMB. Kerr MC, Bennetts JS, Simpson F, Thomas EC, Flegg C, Gleeson PA, Wicking C, Teasdale RD. A Novel Mammalian Retromer Component, Vps26B. Traffic. 2005 Nov. The transcriptional landscape of the mammalian genome. Science. 2005 Sep 2. Simpson F, Martin S, Evans TM, Kerr M, James DE, Parton RG, Teasdale RD. A novel hook-related protein family and the characterization of hook-related protein 1. Traffic. 2005 Jun. Wang B, Wylie FG, Teasdale RD.

3

LOCATE DATABASE UPLOAD - Literature Single

http://ccb.imb.uq.edu.au/Lit_Sub_Single/Lit_Sub_Form.html

LOCATE DATABASE LITERATURE INFO SUBMISSION. Curated literature to submit. Cellular Component Unknown (GO:0008372). Apical Plasma Membrane (GO:0016324). Basolateral Plasma Membrane (GO:0016323). Golgi Cis Cisterna (GO:0000137). Golgi Trans Cisterna (GO:0000137). Golgi Trans Face (GO:0005802). Inner Mitochondrial Membrane (GO:0005743). Outer Mitochondrial Membrane (GO:0005741). How to find PMID. Retrieve article using PubMed.

4

Protein Solvent Accessible Surface Area Predictor (ASAP)

http://ccb.imb.uq.edu.au/ASAP

Protein Solvent Accessible Surface Area Predictor (ASAP). ASAP predicts solvent accessible surface area of proteins. Currently the Web predictor only accepts single protein sequence as input. Please select the type of protein and enter protein sequence in FASTA format in the textarea. To ensure the complete functionality of the predictor:. Your Web browser must have javascript enabled. The minimum sequence length required is 60. The maximum sequence length allowed is 6000. Following is a sample sequence:.

5

Protein Solvent Accessible Surface Area Predictor (ASAP)

http://ccb.imb.uq.edu.au/ASAP/index.shtml

Protein Solvent Accessible Surface Area Predictor (ASAP). ASAP predicts solvent accessible surface area of proteins. Currently the Web predictor only accepts single protein sequence as input. Please select the type of protein and enter protein sequence in FASTA format in the textarea. To ensure the complete functionality of the predictor:. Your Web browser must have javascript enabled. The minimum sequence length required is 60. The maximum sequence length allowed is 6000. Following is a sample sequence:.

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bioinformatics.org.au

Facilities And Groups | ARC Centre of Excellence in Bioinformatics

http://bioinformatics.org.au/bioinformatics-links/institutes-and-groups

ARC Centre of Excellence in Bioinformatics. Tools & Data. Bioinformatics Institute, University of Auckland. Computational Cell Biology Research Group – Dr Rohan Teasdale. Murdoch University – Centre for Comparative Genomics. The Australian Centre for Plant Functional Genomics (ACPFG). WEHI – Genetics and Bioinformatics Research Division. ARC Centre of Excellence in Bioinformatics.

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Computational Cell Biology, Teasdale Group IMB. Protein Sequence Analysis Tools. Golgi Transmembrane Protein Prediction. Support Vector Machines For Predicting Transmembrane Domains. Protein Solvent Accessible Surface Area Predictor (ASAP). Supplementary Data For Published Papers. Supplementary data for mouse proteome analysis. Supplementary data for functional classification of the mouse secretome. Mouse Protein Subcellular Localization Databases. Type II membrane proteins.

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