toppgene.cchmc.org
Links
https://toppgene.cchmc.org/navigation/links.jsp
A one-stop portal for gene list enrichment analysis and candidate gene prioritization. Based on functional annotations and protein interactions network. ToppGene Suite would not be possible without the efforts and contributions to the scientific community of the following institutions. A database for gene annotations. European Molecular Biology Laboratory. The Gene Ontology project provides a controlled vocabulary to describe gene and gene product attributes in any organism. GWAS Central (previously the ...
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About Us and Vision/Mission. About William Ball, MD. The Issue" Dean's Memos. Development and Alumni Affairs. Faculty Affairs and Development. Public Relations and Communications. Make a Gift Now! The UC College of Medicine, founded in 1819 by medical pioneer Daniel Drake, MD, is one of the oldest medical schools in the nation. Academic Support and Counseling. MD/MS in Nutrition Program. Office of Graduate Education (MS/ PhD). Graduate Diversity and Inclusion. Office of Graduate Medical Education. Family...
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toppgene.cchmc.org
Database Information
https://toppgene.cchmc.org/navigation/database.jsp
A one-stop portal for gene list enrichment analysis and candidate gene prioritization. Based on functional annotations and protein interactions network. Updated Jul 18, 2016. Updated Jul 18, 2016. Updated Jul 18, 2016. Updated Sep 8, 2015. BioSystems: Pathway Interaction Database. MSigDB C2 BIOCARTA (v5.1). Feb 24, 2015. Updated Jul 18, 2016. Updated Jul 18, 2016. MSigDB C2: CGP Curated Gene Sets (v5.1). MSigDB C6: Oncogenic Signatures (v5.1). MSigDB C7: Immunologic Signatures (v5.1). Oct 9, 2014.
toppgene.cchmc.org
ToppGene Suite Supplimental
https://toppgene.cchmc.org/help/supplimental.jsp
A one-stop portal for gene list enrichment analysis and candidate gene prioritization. Based on functional annotations and protein interactions network. Examples illustrating the utilities of ToppGene Suite. A Using ToppFun for gene list enrichment analysis. B Using ToppGene for disease gene prioritization based on functional similarity to training set genes. C Using ToppNet for disease gene prioritization based on topological features in PPIN. Examples illustrating the utilities of ToppGene Suite. 3 You...
toppgene.cchmc.org
ToppGenet - Neighboring Genes in Protein-Protein Network
https://toppgene.cchmc.org/network_prioritization.jsp
A one-stop portal for gene list enrichment analysis and candidate gene prioritization. Based on functional annotations and protein interactions network. ToppGenet: Prioritization of neighboring genes in Protein-Protein Interaction Network. Select your gene identifier type, paste your sets below or select example set, then submit. HGNC Symbol and Synonyms. Click on "HGNC Symbol" or "Entrez ID" to use the example "seeds"). 2007-2016 Cincinnati Children's Hospital Medical Center.
toppgene.cchmc.org
ToppGene - Gene Priortization
https://toppgene.cchmc.org/prioritization.jsp
A one-stop portal for gene list enrichment analysis and candidate gene prioritization. Based on functional annotations and protein interactions network. ToppGene: Candidate gene prioritization. Select your gene identifier type, paste your training and test gene sets below or select example sets, then submit. Click on "HGNC Symbol" or "Entrez ID" to use the example training and test set of genes). HGNC Symbol and Synonyms. HGNC Symbol and Synonyms. 2007-2016 Cincinnati Children's Hospital Medical Center.
toppgene.cchmc.org
ToppFun - Functional Enrichment
https://toppgene.cchmc.org/enrichment.jsp
A one-stop portal for gene list enrichment analysis and candidate gene prioritization. Based on functional annotations and protein interactions network. ToppFun: Transcriptome, ontology, phenotype, proteome, and pharmacome annotations based gene list functional enrichment analysis. Select your gene identifier type, paste your sets below or select example set, then submit. HGNC Symbol and Synonyms. Click on "HGNC Symbol" or "Entrez ID" to use the example training and test set of genes).
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