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NaviCell

Web tool for navigation through molecular-interaction network

http://navicell.curie.fr/

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NaviCell | navicell.curie.fr Reviews
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Web tool for navigation through molecular-interaction network
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1 maps
2 features
3 user guides
4 navicell web service
5 contacts
6 publications
7 people
8 acknowledgement
9 resources
10 celldesigner
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maps,features,user guides,navicell web service,contacts,publications,people,acknowledgement,resources,celldesigner,sbgn,cytoscape,binom,literature,databases,cell signaling,kegg,panther,reactome,spike,wikipathways,what is navicell,at institut curie
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NaviCell | navicell.curie.fr Reviews

https://navicell.curie.fr

Web tool for navigation through molecular-interaction network

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1

Citation

https://navicell.curie.fr/pages/citation.html

Data analysis, navigation, curation and maintenance of molecular interactions maps. How to cite us. ACSN Atlas of Cancer Signaling Networks. SBGN Systems Biology Graphical Notation. How to cite us. NaviCell has been published, please cite our publication:. Kuperstein I, Cohen DPA, Pooks S, Viara E, Calzone L, Barillot E and Zinovyev A. NaviCell: a web-based environment for navigation, curation and maintenance of large molecular interaction maps. BMC Syst Biol 2013 7(1):100. Web design by NaviCell team.

2

Tutorial

https://navicell.curie.fr/pages/team.html

Data analysis, navigation, curation and maintenance of molecular interactions maps. How to cite us. ACSN Atlas of Cancer Signaling Networks. SBGN Systems Biology Graphical Notation. NaviCell was realised by:. Web design by NaviCell team.

3

Tutorial

https://navicell.curie.fr/pages/acknowledgements.html

Data analysis, navigation, curation and maintenance of molecular interactions maps. How to cite us. ACSN Atlas of Cancer Signaling Networks. SBGN Systems Biology Graphical Notation. We thank Camille Barette for help in setting up the informatics recourses and Philippe Hupé for fruitful discussions and suggestions during NaviCell development. This work is supported by the APO-SYS EU FP7 project under grant agreement n HEALTH-F4-2007-200767. Web design by NaviCell team.

4

NaviCell

https://navicell.curie.fr/index.html

Data analysis, navigation, curation and maintenance of molecular interactions maps. How to cite us. ACSN Atlas of Cancer Signaling Networks. Systems Biology Graphical Notation. A web tool for exploring large maps of molecular interactions created by the group of Computational Systems Biology of Cancer. NaviCell combines four essential features:. Map browsing by Google map™ engine. Semantic zoom for viewing different levels of details on the map. Web blog for collecting community feedback.

5

Publications

https://navicell.curie.fr/pages/publications2.html

Data analysis, navigation, curation and maintenance of molecular interactions maps. How to cite us. ACSN Atlas of Cancer Signaling Networks. SBGN Systems Biology Graphical Notation. Bauer-Mehren, A., Furlong, L.I. and Sanz, F. Pathway databases and tools for their exploitation: benefits, current limitations and challenges. Mol Syst Biol. 2009 5: 290. PMID:196389. Czauderna, T., Klukas, C. and Schreiber, F. Editing, validating and translating of SBGN maps. BMC Bioinformatics 2008 9: 110. PMID:8289391.

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Computational Systems Biology of Cancer group | Tools

https://sysbio.curie.fr/software.html

Tools developed by us. Tools for network structure analysis, browsing and simulations:. ACSN: Atlas of Cancer Signaling Network. ACSN is a pathway database and a web-based environment that contains a collection of interconnected cancer-related signalling network maps and allows omics data visualization and analysis. Link to the tool page. NaviCell: browsing large networks using Google Maps. A web tool and a web service for exploring large maps of molecular interactions and visualizing data on top of them.

celldesigner.org celldesigner.org

CellDesigner.org

http://www.celldesigner.org/models.html

The Systems Biology Institute. Kitano Symbiotic Systems Project. Directly accessible from CellDesigner's database menu:. Other databases using CellDesigner for Pathway building. Models built with CellDesigner. Calzone L, Gelay A, Zinovyev A, Radvanyl F and Barillot E, Mol Syst Biol. 2008.4; Epub 2008 Mar 4, doi:10.1038/msb.2008.7. A general map of iron metabolism and tissue-specific subnetworks. Mol BioSyst. 2009 5,422-443, doi:10.1039/b816714c. A community-input supported knowledgebase. Adipocyte, hepat...

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SYSRA

http://www.sysra.com/references

SYSRA a travaillé en tant que prestataire de services, formateur ou consultant pour les sociétés et instituts suivants :. CNRS, CRI Infobiogen/Université d’Evry, Défi Formation, Etrali/Orange Business Services, Généthon, GenomeQuest, Génoplante, Génopole d’Evry/Ile de France, Genset, Globe ID, GRIF, INRIA, Institut Curie, IRCAM, NSL, Orphanet/INSERM, Orsys…. Quelques projets sur lesquels SYSRA a travaillé. Un moteur de recherche d’information génétique. De l’ Institut Curie.

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NaviCell

Data analysis, navigation, curation and maintenance of molecular interactions maps. How to cite us. ACSN Atlas of Cancer Signaling Networks. Systems Biology Graphical Notation. A web tool for exploring large maps of molecular interactions created by the group of Computational Systems Biology of Cancer. NaviCell combines four essential features:. Map browsing by Google map™ engine. Semantic zoom for viewing different levels of details on the map. Web blog for collecting community feedback.

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