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160; . Is an effort to promote the sharing of information, know-how, and wisdom among researchers and groups who are working in biology and biological engineering. Learn more about us. If you would like edit access, would be interested in helping out, or want your lab website hosted on OpenWetWare, please. OpenWetWare is managed by the BioBricks Foundation. 160; . From around the world. 160; . Host and view classes. 160; . Share techniques and more. 160; . For more information, please see here.

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160; . Is an effort to promote the sharing of information, know-how, and wisdom among researchers and groups who are working in biology and biological engineering. Learn more about us. If you would like edit access, would be interested in helping out, or want your lab website hosted on OpenWetWare, please. OpenWetWare is managed by the BioBricks Foundation. 160; . From around the world. 160; . Host and view classes. 160; . Share techniques and more. 160; . For more information, please see here.

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OpenWetWare | openwetware.org Reviews

https://openwetware.org

160; . Is an effort to promote the sharing of information, know-how, and wisdom among researchers and groups who are working in biology and biological engineering. Learn more about us. If you would like edit access, would be interested in helping out, or want your lab website hosted on OpenWetWare, please. OpenWetWare is managed by the BioBricks Foundation. 160; . From around the world. 160; . Host and view classes. 160; . Share techniques and more. 160; . For more information, please see here.

SUBDOMAINS

prince.openwetware.org

Prince

Department of Chemistry and Biochemistry. John T. Prince faculty page. Interface to lab pages. Contact Ryan for access or calendar reservations.

posbioinfousp.openwetware.org

Posbioinfousp

Normas Gerais do Programa. Cursos de Verão - 2015. Programa Interunidades de Pós-Graduação em Bioinformática - Universidade de São Paulo. A definição de trabalho que o Programa Interunidades de Pós-Graduação em Bioinformática da Universidade de São Paulo. Usa para entender o que é Bioinformática. Da USP, a serem definidas em função dos programas de pesquisa de cada aluno. Inter-institutional Grad Program on Bioinformatics - University of Sao Paulo. Uses to understand what is Bioinformatics. Is the one in...

peyton.openwetware.org

Peyton

Check out our new website at PeytonLab.Org. This openwetware page is being maintained only for internal lab purposes.

pecreaux.openwetware.org

Pecreaux

Team: "Reverse Engineering Cell Division" (CeDRE). An experimental systems biophysics approach to cell division mechanics. 2 Master practical trainings in molecular cell biology are available, at level M2. Please contact us if you are interested. Spontaneous application for PhD student or Postdoctoral stays. Are welcome provided that you are willing to apply for competitive fundings or have already secured your fellowship ). We have hypothesized that cell division’s diversity of events and stereotypic ch...

nachury.openwetware.org

Nachury

Bardet-Biedl Syndrome (BBS): a disease of the cilium. BBS patients suffer from a variety of symptoms including obesity and polydactyly (upper right). Recently, we discovered that a core complex of BBS proteins (the BBSome) coordinates vesicular transport to the primary cilium (lower left). The Nachury Lab is part of the department of Molecular and Cellular Physiology. At Stanford University School of Medicine.

matsudaira.openwetware.org

Matsudaira

Cambridge, MA 02142. Our research is focused in two areas: the mechanics of the cytoskeleton, and miniaturized ultra-fast bioanalytical devices. We also concentrate on development of advanced imaging and informatics methods through the associated Whitehead-MIT Bioimaging Center.

malooflab.openwetware.org

Maloof Lab

Section of Plant Biology. 1002 Life Sciences, One Shields Ave. University of California Davis. Davis, CA 95616. How do organisms adapt to different environments? We are interested in understanding the genetic and molecular changes that take place as organisms adapt to different environments. Which genes change, what types of genetic changes occur, and how do these changes affect the organism at the biochemical, physiological, and ecological levels? We work on domesticated and wild tomato, Brassica rapa.

lilab.openwetware.org

Li Lab

Computational Cancer Epigenomics and Transcriptomics (PI: Wei Li). Dan L Duncan Cancer Center. Department of Molecular and Cellular Biology. Baylor College of Medicine. 07/2015: Wei will become a regular member of the NIH GCAT. Genomics, Computational Biology and Technology) study section. 07/2015: Kaifu's bioinformatics paper is accepted to Nature Genetics. This work links broad H3K4me3 to pan-cancer tumor suppressors. 06/2015: Kaifu will start his tenure-track faculty. 3/2015: We received a NEW CPRIT.

lauffenburger.openwetware.org

Lauffenburger

labpib.openwetware.org

Labpib

Join the Team Junte-se ao Grupo. Lab Policy Regras do Lab. The Laboratory for Biological Information Processing - LabPIB (after the Portuguese acronym), was created in 2008 with the mission/ambition of contributing to the understanding of biology by means of bioinformatics. O Laboratório de Processamento de Informação Biológica - LabPIB, foi criado em 2008 com a missão/ambição de contribuir para o entendimento da Biologia por meio de pesquisa, ensino e extensão na área de Bioinformática.

INTERNAL PAGES

openwetware.org

1

Barry Canton - OpenWetWare

https://openwetware.org/wiki/Barry_Canton

I'm a cofounder of Ginkgo BioWorks. I did my PhD at MIT with Drew Endy. More. BE Retreat Poster 2006. Who is visiting my page? Retrieved from " http:/ openwetware.org/wiki/Barry Canton. 32; Steering Committee member. Add a Lab Notebook. This page was last modified on 19 February 2009, at 16:24. This page has been accessed 89,682 times. Content is available under GNU FDL or Creative Commons BY-SA.

2

Converting documents to mediawiki markup - OpenWetWare

https://openwetware.org/wiki/Converting_documents_to_mediawiki_markup

Converting documents to mediawiki markup. The initial goal of this page is to work out what existing tools are available to automatically convert documents to mediawiki markup. Based on identified shortcomings in available tools, we'd like to propose some tools that should be developed to facilitate the growth of OpenWetWare. Are some good links. And Help:Porting PDF files to MediaWiki. Converter based on HTML: WikiConverter Perl module. A direct converter can be found here. They seem to work reasonably ...

3

Satya Arjunan - OpenWetWare

https://openwetware.org/wiki/Satya_Arjunan

Books and Book Chapters. I completed my PhD in Systems Biology at the Institute for Advanced Biosciences. Keio University in 2009. My thesis can be found here. I developed a multicompartmental spatiotemporal stochastic simulation method, called Spatiocyte. With applications in bacterial division site placement control. I am also a member of the E-Cell Project. I am a Research Scientist at RIKEN Quantitative Biology Center in Osaka, Japan. My Google Scholar page can be found here. PLoS ONE 10(7): e0130089.

4

Endy Lab - OpenWetWare

https://openwetware.org/wiki/Endy_Lab

Who We Are and What We Do. Retrieved from " http:/ openwetware.org/wiki/Endy Lab. Add a Lab Notebook. Cesar A. Rodriguez. Jason R. Kelly. This page was last modified on 29 March 2013, at 00:31. This page has been accessed 285,920 times. Content is available under GNU FDL or Creative Commons BY-SA.

5

Biomod - OpenWetWare

https://openwetware.org/wiki/Biomod

Is the international bio-molecular design competition. This page will serve to host team wiki pages for each competition. Retrieved from " http:/ openwetware.org/wiki/Biomod. Add a Lab Notebook. This page was last modified on 1 February 2015, at 16:50. This page has been accessed 44,555 times. Content is available under GNU FDL or Creative Commons BY-SA.

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svsci.com

Tools & Utilities - Silicon Valley Scientific

http://www.svsci.com/tools--utilities.html

Is an effort to promote the sharing of information, know-how, and wisdom among researchers and groups who are working in biology and biological engineering. World Map of High Throughput Sequencers. The High-Throughput Sequencing Map site was conceived by James Hadfield. Cancer Research UK, Cambridge) and built by Nick Loman. University of Birmingham). The database is as only as good as you, the users. If you discover inaccuracies or omissions, please take the time to update or add details.

genesafari.blogspot.com

Notes from a Gene Safari: September 2008

http://genesafari.blogspot.com/2008_09_01_archive.html

Notes from a Gene Safari. Wednesday, September 10, 2008. I just finished reading Smail's On Deep History and the Brain. The first few chapters were a boring history of historians writing history. but the last few were pretty fascinating. The idea is that we're built to live in small bands on the savannas of Africa, not giant cities in all climates. Even more intriguing were the ways that he demonstrated that culture can change. I also liked how he pointed out the just so story. Posted by Matt DiLeo.

genesafari.blogspot.com

Notes from a Gene Safari: August 2008

http://genesafari.blogspot.com/2008_08_01_archive.html

Notes from a Gene Safari. Sunday, August 31, 2008. The debilitating power of want". I was hanging out with some friends this weekend when one began telling an anecdote about his travels in Central/South America where he routinely met people who, without any thread of material wealth or possession, managed to be much happier than most (US) Americans he knows. I think there may be something to this. I remember reading a study (I wish I could remember a citation! It sounds kinda funny, but it also resonates...

genesafari.blogspot.com

Notes from a Gene Safari: August 2007

http://genesafari.blogspot.com/2007_08_01_archive.html

Notes from a Gene Safari. Wednesday, August 22, 2007. My one boss is involved in this big peach breeding project that's been running for, I think, decades. He's responsible for disease screening assays on thousands of fruits from different crosses that are produced each summer. One of the universal benefits of working in an ag lab is that we get lots of leftovers every week. It was like a fruit that came with a dessert at the end! The naive idea that the world is split into dialectic opposites of black a...

genesafari.blogspot.com

Notes from a Gene Safari: July 2007

http://genesafari.blogspot.com/2007_07_01_archive.html

Notes from a Gene Safari. Tuesday, July 24, 2007. Humanized moss and cheap drugs. As there's nothing new under the sun, we're back to looking at plants for our medicines. Organisms make chemicals. It's what they do. Chemicals that would be exceedingly expensive to produce in a test tube are routinely produced in our own bodies. So what happens when a chemical in our body is found, under certain conditions, to cure? Many of the advantages of moss also exist in "true" plants, but there are additional ones.

genesafari.blogspot.com

Notes from a Gene Safari: April 2008

http://genesafari.blogspot.com/2008_04_01_archive.html

Notes from a Gene Safari. Saturday, April 26, 2008. Coal as the fuel of the future. I just saw a short piece on the news about Sasol. A South African company that's promising to produce gasoline from coal (profitably and with lower emissions). It seems that every few weeks we hear some scientist or company announce that they're about to release some revolutionary new fuel or fuel system that will solve all our oil woes. I'm pretty jaded to it at this point. Posted by Matt DiLeo. Links to this post. Here'...

cszamudio.wordpress.com

Carlos S. Zamudio of Semantic Laboratories | SLabsReseach | Page 2

https://cszamudio.wordpress.com/page/2

Carlos S. Zamudio of Semantic Laboratories. OWL 2 Web Ontology Language Drafts. October 10, 2008. The W3C has just released draft specifications. For the OWL 2 Web Ontology Language. Interestingly, the sub-languages of OWL 2 are being called profiles. As described in the Profiles. Document, there are 3 OWL 2 profiles currently specified:. Dedicated reasoning algorithms for this profile are available and have been demonstrated to be implementable in a highly scalable way. Semantic Web Industry Review.

cszamudio.wordpress.com

September | 2008 | Carlos S. Zamudio of Semantic Laboratories

https://cszamudio.wordpress.com/2008/09

Carlos S. Zamudio of Semantic Laboratories. September 30, 2008. Slowly we have been migrating from Microsoft Office to the open source office suite OpenOffice. Recently, I upgraded to the most recent IBM Lotus Symphony. Which is based on OpenOffice. I think they’ve done a good job of integrating the various tools into a single user experience, which might be important for some organizations. With IT budgets being squeezed, migrating to OpenOffice strikes me as a no-brainer. September 30, 2008. Carlos S&#...

limsbook.com

LiMSbook.com – Wiki Knowledge Bases

http://www.limsbook.com/wiki

Free, Open Access library for the Laboratory, informatics, Medical and Scientific professional. Join our 17,726 members. Search for LIMS content across all our Wiki Knowledge Bases. Type a search term to find related articles by LIMS subject matter experts. Gathered from the most trusted and dynamic collaboration tools in the laboratory informatics industry. Cloud-Standards.org is maintained by a network of cloud computing experts. Cloud-based laboratory informatics are replacing legacy systems, ...The S...

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OpenWetWare

160; . Is an effort to promote the sharing of information, know-how, and wisdom among researchers and groups who are working in biology and biological engineering. Learn more about us. If you would like edit access, would be interested in helping out, or want your lab website hosted on OpenWetWare, please. OpenWetWare is managed by the BioBricks Foundation. 160; . From around the world. 160; . Host and view classes. 160; . Share techniques and more. 160; . For more information, please see here.

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OpenWf Software Made Simple. OpenWf Designer - A Graphic Tool, Get up and Running! Design your own workflow today! With a set of tools, getting up and running is quick and easy. You also have telephone support to ensure quick and easy installation. Powered by Microsoft .Net technology. View Demo. Please join one of our scheduled webinars. Seminar I: August 11th, 2015 1:00-2:00PM EDT. Seminar II: August 24th, 2015 1:00-2:00PM EDT. To register, contact event@openwf.com.

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openwferu.rubyforge.org

ruote - index

A ruby workflow engine. 2014/12/19: ruote lives on at operati.ca. 2013/11/30: ruote active development ceased. See scaling down ruote. Do not involve ruote in your new project. Is a workflow engine written in Ruby. Ruote is not. A state machine library. Last version is 2.3.0, it was released. Here is a re-hash of the quickstart. Exposing the core concepts in ruote. Ruote as a workflow engine comes as an “onion”. There’s a storage. At the core, taking care of all the persistence. A worker. Pdef = Ruote&#4...

openwfm.org

Open Wildland Fire Modeling E community Wiki - Open Wildland Fire Modeling E community

Open Wildland Fire Modeling E community Wiki. From Open Wildland Fire Modeling E community. Redirected from Main Page. For the latest additions and announcements. See the list of contents. See the help pages. 160; · Contents. 160; · Howtos. 160; · People. 160; · Software. 160; · Projects. 160; · Publications. 160; · Contact. How to get an account. Or the site webmaster webmaster[at]sci.utah.edu. Retrieved from " http:/ www.openwfm.org/w/index.php?