regphos.mbc.nctu.edu.tw

RegPhos

Ulatory Network in Protein Phos. 221 human kinase families. Search the substrate proteins. Search the phosphorylation network ( protein group. INSR,IRS1,GRB2,SOS1,MAP2K1,MAPK1,ELK1. Is a knowledgebased system that can let users input a group of genes/proteins to be explored the phosphorylation network associated with the information of subcellular localization. Due to the annotation of human kinome in KinBase. Is incorporated with the information of protein-protein interaction, functional association, an...

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Ulatory Network in Protein Phos. 221 human kinase families. Search the substrate proteins. Search the phosphorylation network ( protein group. INSR,IRS1,GRB2,SOS1,MAP2K1,MAPK1,ELK1. Is a knowledgebased system that can let users input a group of genes/proteins to be explored the phosphorylation network associated with the information of subcellular localization. Due to the annotation of human kinome in KinBase. Is incorporated with the information of protein-protein interaction, functional association, an...

<META> KEYWORDS

1 phorylation

2 browse kinome

3 phosphorylation prediction

4 expression analysis

5 statistics

6 version 1 0

7 518 human kinases

8 5092 substrate proteins

9 21110 phosphorylation sites

10 quick search

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phorylation,browse kinome,phosphorylation prediction,expression analysis,statistics,version 1 0,518 human kinases,5092 substrate proteins,21110 phosphorylation sites,quick search,search the kinases,reg p,swiss prot,phosida,and hprd

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RegPhos | regphos.mbc.nctu.edu.tw Reviews

https://regphos.mbc.nctu.edu.tw

Ulatory Network in Protein Phos. 221 human kinase families. Search the substrate proteins. Search the phosphorylation network ( protein group. INSR,IRS1,GRB2,SOS1,MAP2K1,MAPK1,ELK1. Is a knowledgebased system that can let users input a group of genes/proteins to be explored the phosphorylation network associated with the information of subcellular localization. Due to the annotation of human kinome in KinBase. Is incorporated with the information of protein-protein interaction, functional association, an...

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regphos.mbc.nctu.edu.tw

1

RegPhos

http://regphos.mbc.nctu.edu.tw/browse_kinase.php

Ulatory Network in Protein Phos. The kinase complement of the human genome, the kinome. Provided a start point for comprehensive investigation of protein phosphorylation. Manning et al. And are subdivided into families, and sometimes subfamilies, based on the sequence of their ePK domains. All 518 human kinases are listed as following, users can clikc into the URL link to investigate the detail information about the kinase and their substrates. Tree view of kinase families. G protein-coupled receptor kin...

2

RegPhos

http://regphos.mbc.nctu.edu.tw/phos_prediction.php

Ulatory Network in Protein Phos. The Cross-validation of the 107 catagorized kinase families. The experimentally verified phosphorylated sites are collected from PhosphoELM and SwissProt. All the 518 kinase genes which were identified by Manning et al. Number of phosphosites in all species. G-protein coupled Receptor Kinase. Beta Adrenergic Receptor Kinase. P70 subfamily of Ribosomal Specific Kinase. Serum and Glucocorticoid Resposive Kinase. Ancient family of atypical kinases. Novel (Nua) Kinase family.

3

RegPhos

http://regphos.mbc.nctu.edu.tw/expression_analysis.php

Ulatory Network in Protein Phos. 221 human kinase families. Search the substrate proteins. Search the phosphorylation network ( protein group. INSR,IRS1,GRB2,SOS1,HRAS,RAF1,MAP2K1,MAPK1,ELK1. Within 98 experiment series (GSE) were collected and normalized by RMA package. GDS562 ( Bone cell tissue culture on amino acid conjugated surfaces. GPL96 (Organism: Homo sapiens, in situ oligonucleotide). GDS596 ( Large-scale analysis of the human transcriptome (HG-U133A). Analysis of skeletal muscle from overweigh...

4

RegPhos

http://regphos.mbc.nctu.edu.tw/help.php

Ulatory Network in Protein Phos. 221 human kinase families. Search the substrate proteins. Search the phosphorylation network ( protein group. INSR,IRS1,GRB2,SOS1,HRAS,RAF1,MAP2K1,MAPK1,ELK1. Associate Professor, Dept. of Biological Science and Technology, Institute of Bioinformatics and Systems Biology, National Chiao Tung University, Taiwan. Assistant Professor, Institute of Tropical Plant Sciences, National Cheng Kung University, Taiwan.

5

RegPhos

http://regphos.mbc.nctu.edu.tw/about.php

Ulatory Network in Protein Phos. 221 human kinase families. Search the substrate proteins. Search the phosphorylation network ( protein group. INSR,IRS1,GRB2,SOS1,HRAS,RAF1,MAP2K1,MAPK1,ELK1. Following figure demonstrates the system flow of RegPhos.

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isblab.life.nctu.edu.tw

Integrative System Biology Laboratory

http://isblab.life.nctu.edu.tw/index.php?lang=en

Integrative System Biology Laboratory. National Chiao Tung University. College of Biological Science and Technology, NCTU. Insitute of Bioinformatics and Systems Biology, NCTU. Laboratory: R555A, Engineering Building 6, 1001 Ta Hsueh Road, Hsinchu, Taiwan 30010, ROC / Tel: 886-3-5712121 Ext. 56957. Office: R557A, Engineering Building 6, 1001 Ta Hsueh Road, Hsinchu, Taiwan 30010, ROC / Tel: 886-3-5712121 Ext. 56952. Contact us: citrate34@gmail.com. Designed by www.dayinflying.net.

isblab.life.nctu.edu.tw

Integrative System Biology Laboratory

http://isblab.life.nctu.edu.tw/publication.php?lang=en

Integrative System Biology Laboratory. Aims to integrate interdisciplinary approaches for provide the insights into important biological problems and the industrial value of clinical applications. We also enable the development of new biological resources with broad applications, especially in microRNAs, protein modifications and gene regulation. Recently, high-throughput sequencing and microarray technology become our major focus both in scientific research and clinical applications. A computational app...

csb.cse.yzu.edu.tw

CSB Lab 計算系統生物學實驗室

http://csb.cse.yzu.edu.tw/member.php

Lasted Update : 2015.08.01. Protein Functions and Structures. Graduate Program in Biomedical Informatics, Yuan Ze University. (2010-2015).

csb.cse.yzu.edu.tw

CSB Lab 計算系統生物學實驗室

http://csb.cse.yzu.edu.tw/publication.php

Lasted Update : 2015.08.01. Journal papers (*Corresponding author) :. Hsien-Da Huang, Tzong-Yi Lee. 2016, "dbPTM 2016: ten-year anniversary of a resource of post-translational modification of proteins" Nucleic Acids Research. 2016 Jan. 4, Vol. 44(D1):D435-D446. (SCI, 2014 IF: 9.112. 20/289 in BIOCHEMISTRY and MOLECULAR BIOLOGY). 2 Chi-Nga Chow, Han-Qin Zheng, Nai-Yun Wu, Chia-Hung Chien, Hsien-Da Huang, Tzong-Yi Lee. 2016 Jan. 4; Vol. 44(D1):D1154-D1160. (SCI, 2014 IF: 9.112. And Shun-Long Weng*, 2016, "...

csb.cse.yzu.edu.tw

CSB Lab 計算系統生物學實驗室

http://csb.cse.yzu.edu.tw/index.php

Lasted Update : 2015.08.01. 計算系統生物學實驗室 Computational Systems Biology Laboratory 成立於2010年，由李宗夷教授. 實驗室於2010年成立，至今已發表超過 50 篇 SCI國際期刊研究論文. 榮獲財團法人徐有庠紀念基金會頒發第十三屆有庠傑出教授獎. 發表論文海報 "Characterization and identification of protein O-linked glycosylation sites based on glycotransferase substrate specificities"，並獲得 Best Poster Presentation Award. 201505.20 - 由 CSB Lab 發佈. Protein Post-translational Modifications 蛋白質後轉譯修飾作用. Cheng-Tsung Lu , Kai-Yao Huang , Min-Gang Su ( joint first authorship), Tzong-Yi Lee.

csb.cse.yzu.edu.tw

CSB Lab 計算系統生物學實驗室

http://csb.cse.yzu.edu.tw/pi.php

Lasted Update : 2015.08.01. Dr Tzong-Yi Lee 李宗夷. Department of Computer Science and Engineering. Graduate Program in Biomedical Informatics. R3312C , Building #3. R1706C , Building #1. 886-3-4638800 ext. 3007. Francis@saturn.yzu.edu.tw. Http:/ csb.cse.yzu.edu.tw. Department of Computer Science and Engineering,. Graduate Program in Biomedical Informatics,. Department of Computer Science and Engineering,. Graduate Program in Biomedical Informatics,. Department of Computer Science and Engineering,. Yi-Fan C...

csb.cse.yzu.edu.tw

CSB Lab 計算系統生物學實驗室

http://csb.cse.yzu.edu.tw/collaborator.php

Lasted Update : 2015.08.01. Graduate Program in Biomedical Informatics, Yuan Ze University. (2010-2015).

csb.cse.yzu.edu.tw

CSB Lab 計算系統生物學實驗室

http://csb.cse.yzu.edu.tw/resource.php

Lasted Update : 2015.08.01. Resource : Tools and Databases 工具開發與資料庫建置. An informative resource for investigating substrate site specificity and functional association of protein post-translational modifications. (Nucl Acids Res, 2013). Http:/ dbptm.mbc.nctu.edu.tw/. An informative resource for exploring structural environment of SNO substrate sites and regulatory networks of S-nitrosylated proteins. (Bioinformatics, 2012). Http:/ dbsno.mbc.nctu.edu.tw/. Http:/ csb.cse.yzu.edu.tw/dbGSH/.

csb.cse.yzu.edu.tw

CSB Lab 計算系統生物學實驗室

http://csb.cse.yzu.edu.tw/link.php

Lasted Update : 2015.08.01. Nucleic Acids Research: Oxford Journals (NAR). Nucleic Acids Research (NAR) publishes the results of leading edge research into physical, chemical, biochemical and biological aspects of nucleic acids and proteins involved in nucleic acid metabolism and/or interactions. Http:/ nar.oxfordjournals.org/. Accelerating the Publication of Peer-reviewed Science. Http:/ www.plosone.org/. Http:/ bioinformatics.oxfordjournals.org/. Sixth International Course: Computational Genomics.

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Happily retired and enjoying time at home. Yes folks, I have finally retired. What is that I hear you say, hurrah it's about time. After 30 years working in the IT industry with over 21 years as an IT Consultant often working away from home in the UK, Europe, the Middle East and the USA it was time for me to hang up my spurs, unhitch the horse and put away the saddle bag. Reg Phipps August 2011. Stay hungry, stay foolish and stay the course. Steve Jobs with the last part added by me. Playing the game GO.

regphos.mbc.nctu.edu.tw

RegPhos

Ulatory Network in Protein Phos. 221 human kinase families. Search the substrate proteins. Search the phosphorylation network ( protein group. INSR,IRS1,GRB2,SOS1,MAP2K1,MAPK1,ELK1. Is a knowledgebased system that can let users input a group of genes/proteins to be explored the phosphorylation network associated with the information of subcellular localization. Due to the annotation of human kinome in KinBase. Is incorporated with the information of protein-protein interaction, functional association, an...

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