introtopython.org
Introduction to Python: An open resource for students and teachers
http://www.introtopython.org/lists_tuples.html
Variables, Strings, and Numbers. While Loops and Input. Mapping Global Earthquake Activity. Lists and Tuples ¶. Previous: Variables, Strings, and Numbers. Naming and defining a list. Accessing one item in a list. Accessing all elements in a list. Modifying elements in a list. Finding an element in a list. Testing whether an element is in a list. Adding items to a list. Creating an empty list. Finding the length of a list. Removing Items from a List. Removing items by position. Removing items by value.
piotrstepniak.com
(Popularno)naukowe – Piotr Stępniak
http://www.piotrstepniak.com/linki/popularnonaukowe
Linki – sztuki walki. Middot; Designed by. Middot; Powered by.
angus.readthedocs.io
Population Genetics Tutorial — angus 5.0 documentation
http://angus.readthedocs.io/en/2016/pop_gen_tutorial.html
Angus 5.0 documentation. Before you guys got here. Started with data from: “Genomic islands of speciation separate cichlid ecomorphs in an East African crater lake”, Malinsky et al 2015. Downloaded VCF from http:/ datadryad.org/resource/doi:10.5061/dryad.770mc. Http:/ datadryad.org/bitstream/handle/10255/dryad.101389/Massoko Dryad VCF final.vcf.gz. These data had been filtered for quality. And only variable sites had been retained. And phased using the program. Start your instance with at least 50 Gb....
bioinf.spbau.ru
What is Single Cell Genomics? | Algorithmic Biology Lab
http://bioinf.spbau.ru/en/single-cell
Skip to main content. St Petersburg Academic University of the Russian Academy of Sciences. What is Single Cell Genomics? Chitsaz et al., 2011 [1] introduced the E V-SC assembler, combining parts of EULER-SR with a modified Velvet, and achieved a significant improvement in the quality of SCS. However, as the authors of E V-SC realized, one needs to change algorithmic design (rather than just modify existing tools like Velvet) to fully utilize the potential of SCS. We present the SPAdes assembler. JP Glot...
bioinf.spbau.ru
QUAST: Quality Assessment Tool for Genome Assemblies | Algorithmic Biology Lab
http://bioinf.spbau.ru/en/quast
Skip to main content. St Petersburg Academic University of the Russian Academy of Sciences. QUAST: Quality Assessment Tool for Genome Assemblies. Our website moved to quast.sf.net. New QUAST page is here. QUAST evaluates genome assemblies. For metagenome assembly evaluation, see MetaQUAST. For contig alignment visualization, see Icarus. QUAST works both with and without a reference genome. The tool accepts multiple assemblies, thus is suitable for comparison. Paper at Bioinformatics journal. April 1, 2016.
bioinf.spbau.ru
BayesHammer | Algorithmic Biology Lab
http://bioinf.spbau.ru/en/spades/bayeshammer
Skip to main content. St Petersburg Academic University of the Russian Academy of Sciences. BayesHammer: Bayesian Clustering for Error Correction in Single-Cell Sequencing. Sergey I. Nikolenko, Anton I. Korobeynikov, Max A. Alekseyev.
bioinf.spbau.ru
SPAdes 3.1.1: a bug fix release | Algorithmic Biology Lab
http://bioinf.spbau.ru/en/content/spades-311-bug-fix-release
Skip to main content. St Petersburg Academic University of the Russian Academy of Sciences. SPAdes 3.1.1: a bug fix release. Introduced several improvements in IonHammer; fixed minor bugs in repeat resolution and scaffolding. Http:/ bioinf.spbau.ru/en/spades.
pauleb.com
Paul Ebreo
http://www.pauleb.com/blog
Day 1: What is AngularJS? Announcement: Ending Test Double Series. Day 34: Mocks in Coffeescript, part 4. Published on Mar 09, 2014. CODING BAT: - http:/ codingbat.com/. INVENT WITH PYTHON - http:/ inventwithpython.com/chapters/. NEWCODER - http:/ newcoder.io/dataviz/part-1/. EVERYDAY PYTHON - http:/ interactivepython.org/runestone/static/everyday/2013/11/1 news.html. THINK LIKE A COMPUTER SCIENTIST - http:/ interactivepython.org/runestone/static/thinkcspy/index.html. Published on Feb 10, 2014. It is a M...
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