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SABIO Biochemical Reaction Kinetics DatabaseSABIO-RK is a relational Database for Biochemical Reactions and their Kinetics.
http://sabio.h-its.org/
SABIO-RK is a relational Database for Biochemical Reactions and their Kinetics.
http://sabio.h-its.org/
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SABIO Biochemical Reaction Kinetics Database | sabio.h-its.org Reviews
https://sabio.h-its.org
SABIO-RK is a relational Database for Biochemical Reactions and their Kinetics.
sabio.h-its.org
Write To SBML
http://sabio.h-its.org/layouts/content/createSBML.gsp
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Newsdetail - Sabio-RK
http://sabio.h-its.org/news/newsdetail/42135558
COMBINE and ERASysAPP Tutorial. COMBINE and ERASysAPP Tutorial. Modelling and Simulation of Biological Models. Http:/ co.mbine.org/events/tutorial2014. Sunday, September 14th, 2014 (9:00 - 18:00). To be advised (in the vicinity of the ICSB venue). Model setup using different software tools and systems biology platforms. Using experimental data for setting up quantitative models. Parameter estimation, optimization and model fitting. Simulation, analysis and visualization of biochemical models. Nicolas Le ...
Webservices - Sabio-RK
http://sabio.h-its.org/layouts/content/webservices.gsp
Manual - including request examples.
Newsdetail - Sabio-RK
http://sabio.h-its.org/news/newsdetail/45694487
SABIO-RK links to MetaCrop. Enzymes in SABIO-RK are now linked to corresponding plant data in the MetaCrop database. Is a database that contains diverse information about metabolic pathways in crop plants.
Documentation - Sabio-RK
http://sabio.h-its.org/layouts/content/documentation.gsp
For programmatic access to the database web services were implemented allowing data access via HTTP requests following a Representational State Transfer (REST) approach. Search Short Video Tutorial. RESTFUL Web Services Documentation.
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KiMoSys: a web-based repository of experimental data for Kinetic Models of biological Systems
http://www.kimosys.org/links
Related External LINKS TO. Modeling tool for biochemical networks. Mathematical modeling of dynamical systems. Parameter estimation tool for SBML based models. Systems Biology toolbox for MATLAB. Standards and exchange formats. Systems Biology Markup Language. Minimum Information Requested in the Annotation of Models. Minimum Information About a Simulation Experiment. Systems Biology Graphical Notation. Simulation Experiment Description Markup Language. Kyoto Encyclopedia of Genes and Genomes.
The Interaction Analysis and Modelling Experiments
http://wel-data.cs.manchester.ac.uk/assays/8
Behaviour inference from low-level data. Behaviour inference from low-level data. Processing big quantities of low-level events and making sense out of them is not a trivial task. We grouped the events in episodes using an empirically solid inactivity threshold, and we used MapReduce to analyse them, using both the user and episode as the "mapping" function. The algorithms create new collection in the database with the resulting behaviours. Each file serves to analyse different type of behaviours:. Creat...
The Interaction Analysis and Modelling Datasets
http://wel-data.cs.manchester.ac.uk/data_files
Interaction Analysis and Modelling. Created: 11th Jul 2016 at 23:15, Last updated: 28th Oct 2016 at 18:08. RNL - Script for data processing. Interaction Analysis and Modelling. Created: 20th Jun 2016 at 13:00. RNL - Database sample to compute data quality (group B). Interaction Analysis and Modelling. Created: 20th Jun 2016 at 12:59. RNL - Database sample to compute data quality (group A). Interaction Analysis and Modelling. Created: 20th Jun 2016 at 12:58. RNL - Unique entries for A/B allocation.
The Interaction Analysis and Modelling Publications
http://wel-data.cs.manchester.ac.uk/publications
To Sign Up, or not to Sign Up? Interaction Analysis and Modelling. Many citizen science projects ask people to create an account before they participate - some require it. What effect does the registration process have on the number and quality of contributions? Dunne Robert,Gelsthorpe David. Proceedings of the 2016 CHI Conference on Human Factors in Computing Systems - CHI '16. To Sign Up, or not to Sign Up? Created: 20th Jun 2016 at 13:02, Last updated: 20th Jun 2016 at 13:03. Overcoming the pitfalls o...
Virtual Liver SEEK SOPs
http://seek.virtual-liver.de/sops
SOP- IF imaging of lipid nanoparticles (LNPs) in perfused liver - Marino Zerial-MPI-CBG. Anja Zeigerer, Jerome Gilleron, Konstantina Diamantara, Marino Zerial. A32: Cross-talk of signaling pathways and endocytic machinery in hepato. C: Liver lobule level. 6th Dec 2013 at 10:37 Last updated:. 11th Jan 2016 at 15:18. SOP- EM of lipid nanoparticles (LNPs) in vivo - Marino Zerial-MPI-CBG. Anja Zeigerer, Jerome Gilleron, Konstantina Diamantara, Marino Zerial. 6th Dec 2013 at 10:36 Last updated:. Chromatin imm...
Virtual Liver SEEK
http://seek.virtual-liver.de/tags/274
No objects (or none that you are authorized to view) are tagged with ' Affymetrix. Log in / Register. Miniaturized 3D bioreactor system. SAB Meeting Leipzig 2012. Show Case Steatosis Meeting. Virtual Liver Retreat 2012 Hünfeld. Virtual Liver Retreat 2013 Hünfeld. VLN Retreat 2012 Hünfeld. VLN Retreat 2013 Hünfeld. Related Projects and friends. Silk icons 1.3.
Virtual Liver SEEK Projects
http://seek.virtual-liver.de/projects
A32: Cross-talk of signaling pathways and endocytic machinery in hepatocytes: Impact on cell polarity and presence of transporters. F3: Kinetic data handling. Http:/ sabio.h-its.org/. Access to reaction kinetic data curated from the literature or taken from experiments within the Virtual Liver network via SABIO-RK. Estimation of kinetic parameters or ligand binding properties. Http:/ www.hepatosys.de/. B1: Intercellular communication of hepatocytes and macrophages. C: Liver lobule level. Http:/ systembio...
Virtual Liver SEEK Models
http://seek.virtual-liver.de/models
Andreas Dräger, Roland Keller, Stephanie Hoffmann. This is HepatoNet1 including MIRIAM annotations. 23rd Mar 2012 at 11:41 Last updated:. 12th Jan 2016 at 08:13. Human Geometric Liver Model. 30th Jul 2015 at 09:25. Simplified model of hepatic glucose metabolism used for perfusion integration. Ordinary differential equations (ODE). For detailed description see:. Biomech Model Mechanobiol. 2015 Jun;14(3):515-36. doi: 10.1007/s10237-014-0619-z. Epub 2014 Sep 19. 30th Jun 2015 at 07:24. 23rd Jun 2015 at 21:05.
Virtual Liver SEEK People
http://seek.virtual-liver.de/people
There are no People found that are visible to you. Log in / Register. Miniaturized 3D bioreactor system. SAB Meeting Leipzig 2012. Show Case Steatosis Meeting. Virtual Liver Retreat 2012 Hünfeld. Virtual Liver Retreat 2013 Hünfeld. VLN Retreat 2012 Hünfeld. VLN Retreat 2013 Hünfeld. Related Projects and friends. Silk icons 1.3.
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SABIO Biochemical Reaction Kinetics Database
SABIO-RK is a curated database that contains information about biochemical reactions,. Their kinetic rate equations with parameters and experimental conditions. SABIO-RK links to MetaCrop. Enzymes in SABIO-RK are now linked to corresponding plant data in the MetaCrop database. more. COMBINE and ERASysAPP Tutorial. SABIO-RK at the tutorial "Modelling and Simulation of Biological Models" on Sunday, September 14th, 2014 at the ICSB in Melbourne more.
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