soybase.org soybase.org

soybase.org

SoyBase.org

SoyBase, the USDA-ARS Soybean Genetics and Genomics Database. This database contains genetic and genomic data for soybean, Glycine max and related species. Data includes soybean gene calls, gene sequences, Affymetrics SoyChip probe sequence, soybean transposeable elements, soybean chromosome sequences and genetic and sequence maps

http://www.soybase.org/

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CONTACTS AT SOYBASE.ORG

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David Grant

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A●s , IA, 50011

US

1.51●●●●1205
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USDA-ARS

David Grant

G304 Agr●●●●●●●●all, ISU

A●s , IA, 50011

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SoyBase.org | soybase.org Reviews
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SoyBase, the USDA-ARS Soybean Genetics and Genomics Database. This database contains genetic and genomic data for soybean, Glycine max and related species. Data includes soybean gene calls, gene sequences, Affymetrics SoyChip probe sequence, soybean transposeable elements, soybean chromosome sequences and genetic and sequence maps
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1 soybase home
2 help and tutorials
3 genetic map
4 sequence map
5 expression
6 mutants
7 projects
8 tools
9 community
10 site map
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soybase home,help and tutorials,genetic map,sequence map,expression,mutants,projects,tools,community,site map,sign up here,soybase toolbox,soybase search locus,trait,gene,advanced search→,download soybean data,full blast→,select output format,select blast
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SoyBase.org | soybase.org Reviews

https://soybase.org

SoyBase, the USDA-ARS Soybean Genetics and Genomics Database. This database contains genetic and genomic data for soybean, Glycine max and related species. Data includes soybean gene calls, gene sequences, Affymetrics SoyChip probe sequence, soybean transposeable elements, soybean chromosome sequences and genetic and sequence maps

INTERNAL PAGES

soybase.org soybase.org
1

University of Missouri leads soybean sequencing effort - SoyBase

http://www.soybase.org/Nguyen_sequencing

SoyBase and the Soybean Breeder's Toolbox. Follow us on Twitter @SoyBaseDatabase. Integrating Genetics and Molecular Biology for Soybean Researchers. University of Missouri Leads Soybean Sequencing Effort. As part of this project, the southern U.S. soybean cultivar "Lee" (PI 548656) was selected for sequencing to create a second reference genome in soybean. This will complement the first reference genome, "Williams82", that was chosen to represent the northern U.S. germplasm. List of Sequenced Cultivars.

2

Soybase Site Map

http://www.soybase.org/sitemap.php

SoyBase and the Soybean Breeder's Toolbox. Follow us on Twitter @SoyBaseDatabase. Integrating Genetics and Molecular Biology for Soybean Researchers. SoyBase Home Page and Toolbox. Genetic and Physical Map Resources. SoyBase Home Page and Toolbox. Quickly Search All of SoyBase (in SoyBase Toolbox). Tools for extracting and downloading all or subsets of the data in SoyBase. Download genetic map coordinates for selected features. Download sequences for genetic loci. Download gene model flanking sequence.

3

SoyBase.org Meeting Announcements

http://www.soybase.org/soymeet/rss.php

Http:/ www.soybase.org. This is our meetings announcement newsfeed. Sat, 03 September 2016 10:26:21 -0500. NCERA-200 Soybean Virus Research Group annual meeting. Http:/ www.soybase.org/soymeet/meetview.php#NCERA-200 Soybean Virus Research Group annual meeting. The meeting will be held on the Iowa State University campus in Ames, IA. Model Legume Congress 2011. Http:/ www.soybase.org/soymeet/meetview.php#Model Legume Congress 2011. Plant and Animal Genome XIX Conference. Plants for the Future. Http:/ www&...

4

SoyBase.org

http://www.soybase.org/dlpages/index.php

SoyBase and the Soybean Breeder's Toolbox. Follow us on Twitter @SoyBaseDatabase. Integrating Genetics and Molecular Biology for Soybean Researchers. Bull;Download genetic map coordinates for selected features. Bull;Download sequences for genetic loci. Bull;Download sequences from SoyBase BLAST target databases. Bull;Glyma 1.1 to Glyma2.0 Correspondence Lookup. Bull;Download genome sequence coordinates for selected features. Bull;Download genome sequence coordinates for selected features by chromosome.

5

SoyBase.org

http://www.soybase.org/sbt

SoyBase and the Soybean Breeder's Toolbox. Follow us on Twitter @SoyBaseDatabase. Integrating Genetics and Molecular Biology for Soybean Researchers. Soybean Genetic Map Information. Choose a Linkage Group. Search SoyBase for Genetic Information. Perform searches of our entire data set. Located in the SoyBase Toolbox. View or download a list. Of genetic markers or other features by linkage group. Genetic and Sequence Maps Comparison. Choose a Linkage Group. Browse SoyBase Data [ Help.

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LINKS TO THIS WEBSITE

planteome.org planteome.org

Project Participants and Collaborations | Planteome

http://www.planteome.org/node/6

Project Participants and Collaborations. Pankaj Jaiswal [ Plant Ontology. Sinisa Todorovic [ lab website. Eugene Zhang [ lab website. Laurel Cooper [ Plant Ontology. New York Botanical Garden. Dennis Stevenson [ lab website. Lawrence Berkeley National Laboratory. Chris Mungall [ lab website. Bioversity International and Crop Ontology Project. Elizabeth Arnaud [ Crop Ontology Website. Leo Valette- Integrated Breeding Platform [ IBP website. And many other partners at all the CG Centers. Jean-Luc Jannink),...

ikushu.kais.kyoto-u.ac.jp ikushu.kais.kyoto-u.ac.jp

育種学研究室メンバー紹介

http://www.ikushu.kais.kyoto-u.ac.jp/link.html

DNA Data Bank od Japan. Natinal Center for Biotechnology Infomation(PubMed etc.). Rice Genome Research Program. 近畿作物 育種研究会 公開シンポジウム 変異創成技術の現状と未来.

cropgenetics.cses.vt.edu cropgenetics.cses.vt.edu

Soybean Breeding

http://www.cropgenetics.cses.vt.edu/soybeanbreeding/index.html

Crop Genetics at Virginia Tech. Assistantships and Job Opportunities. Germplasm and Cultivar Releases. You are here: Home. The Soybean Breeding Program has three main goals:. Develop new varieties of soybean. Research genetic improvement of soybean and other crops. Train students in plant breeding. If you are interested in learning more, becoming a student or working with us, planting our varieties, or collaborating with us, please explore this site and contact Dr. Katy Martin Rainey.

podb3.nibb.ac.jp podb3.nibb.ac.jp

The Plant Organelles Database 3

http://podb3.nibb.ac.jp/Organellome/external_links.php

The Plant Organelles Database 3. AtPID (Arabidopsis thaliana Protein Interactome Database). Http:/ www.megabionet.org/atpid/webfile/. Http:/ cocoagendb.cirad.fr/. Http:/ www.genoscope.cns.fr/spip/Vitis-vinifera-e.html. Gramene (A Resource for Comparative Grass Genomics). Http:/ www.gramene.org/. GreenPhylDB (A phylogenomic database for plant comparative genomics). Http:/ www.greenphyl.org/cgi-bin/index.cgi. KATANA (Kaszusa Arabidopsis thaliana Annotation Abstract). Kazusa Full-length Tomato cDNA Database.

staceylab.missouri.edu staceylab.missouri.edu

Links | Legume-Microbe Interactions Laboratory

http://staceylab.missouri.edu/links

National Center for Biotechnology Information. DNA Data Bank of Japan. The Institute for Genomics Research. Clemson University Genomics Institute. University of Missouri (MU). MU Center for Sustainable Energy. Soybean Knowledge Base (SoyKB). Soybean Genomics and Biotechnology Center. North Central Soybean Research Program. Missouri Soybean Merchandising Council. TIGR Soybean Gene Index. The Arabidopsis Information Resource. Arabidopsis Functional Genomics Consortium. Syngenta Arabidopsis Insertion Library.

comparative-legumes.org comparative-legumes.org

Legume Information System

http://www.comparative-legumes.org/pages/resources

Search sequenced legume genomes. CViT search by sequence. Leggle Gene Family Pages. Some plant genome and gene family tools. Plant genomes and gene families. A resource for plant comparative genomics. Synteny browser for plant genomes, including. Plant genome duplication database. A database of phylogenetic trees and alignments for plants and other taxa. Descriptive information about the family. Soybean genetic and genomic data: genome browser, maps, trait and QTL data, pathways, . Static files with anno...

oziasakinslab.org oziasakinslab.org

Sequence Databases and Bioinformatics Tools | Ozias-Akins Biotechnology Laboratory

http://oziasakinslab.org/links/bioinformatics-tools

Plant Biotechnology: Peanut & Grasses. Education & Outreach. Sequence Databases and Bioinformatics Tools. Papers & Presentations. Sequence Databases and Bioinformatics Tools. Peggy Ozias-Akins The University of Georgia. First peanut genome sequenced. April 4, 2014. Proudly powered by WordPress.

plantontology.org plantontology.org

Collaborations | Plant Ontology (PO)

http://www.plantontology.org/node/8

UK: John Doonan and Georgios Gkoutos (Coordinators; Aberystwyth Univ), Paul Kersey EBI, Luke Ramsay and Dave Marshall (J. Huttion Inst.), Chris Rawlings (Rothamstead). France: Cyril Pommier, Jacques Legouis, Francois Tardieu (INRA). Germany: Fabio Fiorani and Uli Schurr (Julich) Bjorn Usadel (Aachen Univ.),. Eva Huala (Stanford Univ.), Doreen Ware ( Gramene Database. Chris Town ( Arabidopsis Information Portal. Mary Schaeffer and Carolyn Lawrence ( MaizeGDB. Doreen Ware ( Gramene Database. Eva Huala ( Ph...

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