Computational biochemistry and genomics. Modeling protein structures / designing novel folds. Structural genomics / receptor-ligand interaction of IGSF proteins. Evolution of robustness in gene networks / protein-DNA interactions.
http://toro.aecom.yu.edu/
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Fiser Lab - Albert Einstein College of Medicine | toro.aecom.yu.edu Reviews
https://toro.aecom.yu.edu
Computational biochemistry and genomics. Modeling protein structures / designing novel folds. Structural genomics / receptor-ligand interaction of IGSF proteins. Evolution of robustness in gene networks / protein-DNA interactions.
toro.aecom.yu.edu
Fiser Lab - Albert Einstein College of Medicine
http://toro.aecom.yu.edu/people.php
Joseph.dybas at phd.einstein.yu.edu. Fajardo, Eduardo J, PhD. Eduardo at fiserlab.org. Fiser, Andras, PhD. Andras.fiser at einstein.yu.edu. Nelson.gil at med.einstein.yu.edu. Madrid-Aliste, Carlos J. Cmadrid at fiserlab.org. Altucker at einstein.yu.edu. Viswanathan, Raji, PhD. Raji at yu.edu. Yap, Enghui, PhD. Enghui.yap at einstein.yu.edu. Rai, Brajesh Kumar.
Fiser Lab - Albert Einstein College of Medicine
http://toro.aecom.yu.edu/proteomics.htm
Albert Einstein Proteomics Research Centers. Center for identifying therapeutic targets in waterborne parasites. Center to evaluate and study the interactions of drug addiction and its tretament on the development and progression of HIV associated neurocognitive disorders (HAND). Construct design web interface.
Fiser Lab - Albert Einstein College of Medicine
http://toro.aecom.yu.edu/publications.php
Review, book chapter. Najmi M, Zhao R, Fiser A, Goldman ID. Role of the tryptophan residues in proton-coupled folate transporter (PCFT-SLC46A1) function. Am J Physiol Cell Physiol. Ness JK, Skiles AA, Yap EH, Fajardo EJ, Fiser A, Tapinos N. Nuc-ErbB3 regulates H3K27me3 levels and HMT activity to establish epigenetic repression during peripheral myelination. Zhao R, Najmi M, Fiser A, Goldman ID. Vallat B, Madrid-Aliste C, Fiser A. Buprenorphine decreases the CCL2-mediated chemotactic response of monocytes.
Fiser Lab - Albert Einstein College of Medicine
http://toro.aecom.yu.edu/servers_table.htm
Servers for Sequence Alignment and Comparative Modelling. Sequence alignment profile generator. Modeling loops in protein structures. 500-500 8 and 12 residue long, optimized loops for 40 proteins. Multiple Mapping Method: a sequence-to-structure alignment tool. Comparative Modelling using a combination of multiple templates and interative optimization of alternative alignments. Comparative Modelling using an iterative sequence to structure alignmnet approach. Servers for Sequence Analysis.
Fiser Lab - Albert Einstein College of Medicine
http://toro.aecom.yu.edu/our_programs.htm
Downloadable programs and data from publications. Structure-based determination of transcription factor binding sites. RF HA SRS RF CB SRS OD. Smotif Database (MySQL, compressed, 428Mb! SmotifCOMP-based SCOP Superfamily network Readme. SMOTIFCS implement a hybrid protein modeling algorithms that relies on a library of protein super-secondary structure motifs (Smotifs) and easily obtainable NMR experimental data.
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Fiser Lab - Albert Einstein College of Medicine
Computational biochemistry and genomics. Modeling protein structures / designing novel folds. Structural genomics / receptor-ligand interaction of IGSF proteins. Evolution of robustness in gene networks / protein-DNA interactions.
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