wiki.brisskit.le.ac.uk

BRISSKit wiki

Welcome to the BRISSKit Wiki! For a gentle introduction to what BRISSkit is have a look at the project website. In this wiki you will find much more in depth technical information. The List of categories. Help you find what you want. I2b2 Uploader Portal Guide. BRISSkit Scope and Exclusions. Major issues to address. Issues around ONYX ONTOLOGY and Mapping. Some background from Jeff. Issues-caTissue2.0 to address in Ph2'. Issues around version 2.0 of caTissue (raised by Gavin). Documented by Nick and Soma.

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BRISSKit wiki | wiki.brisskit.le.ac.uk Reviews

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Welcome to the BRISSKit Wiki! For a gentle introduction to what BRISSkit is have a look at the project website. In this wiki you will find much more in depth technical information. The List of categories. Help you find what you want. I2b2 Uploader Portal Guide. BRISSkit Scope and Exclusions. Major issues to address. Issues around ONYX ONTOLOGY and Mapping. Some background from Jeff. Issues-caTissue2.0 to address in Ph2'. Issues around version 2.0 of caTissue (raised by Gavin). Documented by Nick and Soma.

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BRISSKit wiki | wiki.brisskit.le.ac.uk Reviews

https://wiki.brisskit.le.ac.uk

Welcome to the BRISSKit Wiki! For a gentle introduction to what BRISSkit is have a look at the project website. In this wiki you will find much more in depth technical information. The List of categories. Help you find what you want. I2b2 Uploader Portal Guide. BRISSkit Scope and Exclusions. Major issues to address. Issues around ONYX ONTOLOGY and Mapping. Some background from Jeff. Issues-caTissue2.0 to address in Ph2'. Issues around version 2.0 of caTissue (raised by Gavin). Documented by Nick and Soma.

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wiki.brisskit.le.ac.uk

1

Major issues to address - BRISSKit wiki

http://wiki.brisskit.le.ac.uk/wiki/Major_issues_to_address

Major issues to address. Just a few of the issues that keep me awake at night. Software and OS updates. Long term data curation. SQL Server Licensing Issue. Augmenting Our Test Data. Do it the hard way. Alter the US Demo System. Transform existing live data. Some other things worth pondering. Starting to address this in Backups. My feeling is that this should be driven by the N3 rules and regulations, but that is very much an uninformed opinion! There are several things we need to consider:. We could go ...

2

Proposal on CaTIssue Integration - BRISSKit wiki

http://wiki.brisskit.le.ac.uk/wiki/Proposal_on_CaTIssue_Integration

Proposal on CaTIssue Integration. Retrieved from " http:/ wiki.brisskit.le.ac.uk/w/index.php? Title=Proposal on CaTIssue Integration&oldid=317. This page was last modified on 23 July 2012, at 14:36. This page has been accessed 596 times.

3

Install procedures - BRISSKit wiki

http://wiki.brisskit.le.ac.uk/wiki/Install_procedures

From the vanilla Ubuntu OS. Ie the whole stack. CaTissue 1.2 Plus v20 install. I2b2 install 1.6.9. Retrieved from " http:/ wiki.brisskit.le.ac.uk/w/index.php? This page was last modified on 5 June 2013, at 12:42. This page has been accessed 1,055 times.

4

Issues around version 2.0 of caTissue (raised by Gavin) - BRISSKit wiki

http://wiki.brisskit.le.ac.uk/wiki/Issues_around_version_2.0_of_caTissue_(raised_by_Gavin)

Issues around version 2.0 of caTissue (raised by Gavin). Will you be making more UK specific re: IRBs? We don't have IRBs, and the ethics board location won't typically be a site as listed in caTissue. Yes, we can customize as per your requirement.Please provide more details. In specimen requirements what are "Specimen Creation Event" and "Processing SPP". And within "Processing SPP" were "CollRec" and "FlexParam" something you created? In caTissue v.2.0 how do you state the collection tubes? Why is "con...

5

Some background from Jeff - BRISSKit wiki

http://wiki.brisskit.le.ac.uk/wiki/Some_background_from_Jeff

Some background from Jeff. ONTOLOGY PROCESS- Options to Build Questionnaire By Jeff Lusted dated 24th Jan 2012. Tim and Rob have been given the task of coming up with a process that can be used to design Brisskit questionnaires where the ontology is SNOMED based. 1) Rob is working on using the Onyx (v1.8) GUI questionnaire builder and the upload and download facilities of Onyx. How these fit together depends somewhat on where you start. Using the GUI Questionnaire Builder. 1) Rob has found difficulties w...

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brisskit.le.ac.uk

NHSHACKDAY - BRISSKIT+HEALTHKIT = ? | BRISSKit

https://www.brisskit.le.ac.uk/node/56

Skip to main content area. Biomedical Research Infrastructure Software Service kit. Malcolm Newbury's blog. NHSHACKDAY - BRISSKIT HEALTHKIT =? Submitted by Malcolm Newbury. On Wed, 13/05/2015 - 18:58. Another hackday appearance for the myself, Saj and Russ this weekend as we travel to London's Guys Hospital for another NHSHackday bash. Malcolm Newbury's blog. BRISSKit Technical Description paper published, Aug 2016. BRISSKit short animated explainer! Full Software and Documentation Release, July 2016.

brisskit.le.ac.uk

Updated Jisc website for BRISSKit Oct 2014 | BRISSKit

https://www.brisskit.le.ac.uk/node/48

Skip to main content area. Biomedical Research Infrastructure Software Service kit. Jonathan Tedds's blog. Updated Jisc website for BRISSKit Oct 2014. Submitted by Jonathan Tedds. On Thu, 30/10/2014 - 18:11. See the following link for our new Jisc website :). Http:/ www.jisc.ac.uk/research/projects/biomedical-research-software-ser. Content and links will be updated from Oct 2014. Jonathan Tedds's blog. BRISSKit Technical Description paper published, Aug 2016. BRISSKit short animated explainer!

brisskit.le.ac.uk

About us | BRISSKit

https://www.brisskit.le.ac.uk/about

Skip to main content area. Biomedical Research Infrastructure Software Service kit. BRISSKit is led by Dr Jonathan Tedds. Senior Research Fellow in Health And Research Data Informatics in the Department of Health Sciences at the University of Leicester. Jisc. Working in partnership with the University of Leicester, investigated the development of BRISSKit into a service to be offered to UK universities as part of the Jisc portfolio. Its main aim was to design, deliver and begin to exploit a national data...

brisskit.le.ac.uk

BRISSKit at EHI Live at the NEC, Birmingham, Nov 4-5th 2014 | BRISSKit

https://www.brisskit.le.ac.uk/node/49

Skip to main content area. Biomedical Research Infrastructure Software Service kit. Jonathan Tedds's blog. BRISSKit at EHI Live at the NEC, Birmingham, Nov 4-5th 2014. Submitted by Jonathan Tedds. On Thu, 30/10/2014 - 18:59. BRISSKit will be speaking and demonstrating at the E-Health Insider EHI Live conference. At the NEC Hall 1, Birmingham on the 4th and 5th Nov 2014. Free registration to the event is available through the EHI Live website! We are exhibiting as part of the Skunkworks Open Source. BRISS...

brisskit.le.ac.uk

Final agenda for community meet + hack Feb 23-24th 2015! | BRISSKit

https://www.brisskit.le.ac.uk/node/55

Skip to main content area. Biomedical Research Infrastructure Software Service kit. Jonathan Tedds's blog. Final agenda for community meet hack Feb 23-24th 2015! Submitted by Jonathan Tedds. On Wed, 18/02/2015 - 14:12. We're excited to announce the final agenda for the community meet hack on Feb 23rd - 24th at College Court, Leicester. See the event link for details: https:/ www.brisskit.le.ac.uk/civicrm/event/info? We can squeeze in a last handful if you're quick! Jonathan Tedds's blog.

brisskit.le.ac.uk

Health Research Meet + Hack, Feb 23-24th 2015 | BRISSKit

https://www.brisskit.le.ac.uk/node/51

Skip to main content area. Biomedical Research Infrastructure Software Service kit. Jonathan Tedds's blog. Health Research Meet Hack, Feb 23-24th 2015. Submitted by Jonathan Tedds. On Mon, 22/12/2014 - 13:27. We invite you to register for the event http:/ www.brisskit.le.ac.uk/sites/all/modules/civicrm/extern/url.php? And also to join our heatlhresearchhack googlegroup https:/ groups.google.com/forum/#! Jonathan Tedds's blog. BRISSKit Technical Description paper published, Aug 2016. Feb 2015 Hack Event -...

brisskit.le.ac.uk

New national investment in BRISSKit for Aug 2014 - Aug 2016! | BRISSKit

https://www.brisskit.le.ac.uk/node/47

Skip to main content area. Biomedical Research Infrastructure Software Service kit. Jonathan Tedds's blog. New national investment in BRISSKit for Aug 2014 - Aug 2016! Submitted by Jonathan Tedds. On Thu, 25/09/2014 - 16:11. I am pleased to announce a major new investment of funding from Jisc for August 2014 - August 2016 to build on the work to date and work with Jisc to implement services for researchers across the UK from 2016. Thanks to our users and collaborators for their continued support :).

brisskit.le.ac.uk

Products & Services | BRISSKit

https://www.brisskit.le.ac.uk/products-services

Skip to main content area. Biomedical Research Infrastructure Software Service kit. BRISSKit offers the ability to upload, manage, combine and collaborate with datasets in-project using a secure infrastructure and then enables analytics and reuse. The use of open source tools for common tasks allows researchers to integrate their own more specialized software and analytics expertise using the platform. Illustration of the relationship between the different aspects of the software stack. Each of the appli...

brisskit.le.ac.uk

Use Cases | BRISSKit

https://www.brisskit.le.ac.uk/case-studies

Skip to main content area. Biomedical Research Infrastructure Software Service kit. Use cases include the 100k Genomes Project. With University Hospitals Leicester NHS Trust. NIHR funded Leicester Cardiovascular. Leicester Cancer Research Biobank. Environmental health research involving aerosols. With the Leicester Earth Observation Science. Group; National Centre for Sports and Exercise Medicine. At Loughborough and a key collaboration with the D2K Data to Knowledge research group. University Hospitals ...

brisskit.le.ac.uk

User account | BRISSKit

https://www.brisskit.le.ac.uk/user/password

Skip to main content area. Biomedical Research Infrastructure Software Service kit. Request new password (active tab). Username or e-mail address *. BRISSKit Technical Description paper published, Aug 2016. BRISSKit short animated explainer! Full Software and Documentation Release, July 2016. Update from Leicester Cardiovascular Biomedical Research Unit on use of i2b2, civiCRM, RedCap in Cardiovascular Research. Update on BRISSKit and University of Bristol / ALSPAC Synergies - Dr Olly Butters.

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Welcome to the BRISSKit Wiki! For a gentle introduction to what BRISSkit is have a look at the project website. In this wiki you will find much more in depth technical information. The List of categories. Help you find what you want. I2b2 Uploader Portal Guide. BRISSkit Scope and Exclusions. Major issues to address. Issues around ONYX ONTOLOGY and Mapping. Some background from Jeff. Issues-caTissue2.0 to address in Ph2'. Issues around version 2.0 of caTissue (raised by Gavin). Documented by Nick and Soma.

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